PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g260260.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 574aa MW: 65403.3 Da PI: 5.7401

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g260260.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	75.8	7.7e-24	373	466	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +r+w+e De+++LqGl+d+ a+ g s +d++ fy ++ +s +++ksql+eK+rr+++Kf+ +++ ++g + s ++hd+ ++ls+k+ Pd.00g260260.m01 373 YHRIWTEPDELLFLQGLLDC-ASDGFSFPKDLHLFYARFSTTVSQHYTKSQLSEKLRRFRRKFRVVSARLARGLHESQLSPHDRALYDLSRKL 464 68*****************.7789999**************************************************************** PP DUF573 96 Wg 97 W Pd.00g260260.m01 465 WS 466 *7 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MSKTLGNVID PLDTIKEYGT DALRFTIALG TAGQDLNLST ERLTSNKAFT NKLWNAGKFV 60 LQNLPSQNDA SAWENILSYK FDKVELLDKL PLPECWVISK LHLLIDAVTA SYENFFFGDV 120 GRETYEFFWG DFADWYIEAS KARLYHSGGD SVASVTQAVL LYVFENILKL LHPFMPFVTE 180 ELWQALPYRK EALIISPWPL TSLPRKSNSI KKFENLQALT RAIRNARAEY SVEPVKRISA 240 SIVANEEVTE YIVKEKEVLA LLSRLDLQNI HFTDSPPGNA DQSVHLVAGE GLEAYLPLAD 300 MIDITAEIQR LSKRLSKMQT EYDGLKARLS SPKFVEKAPE DIVRGVQEKA AETEEKITLT 360 KNQDGQRTPP FKYHRIWTEP DELLFLQGLL DCASDGFSFP KDLHLFYARF STTVSQHYTK 420 SQLSEKLRRF RRKFRVVSAR LARGLHESQL SPHDRALYDL SRKLWSSECW STSPFGNKAK 480 SDEGDDNLMV NQNQSVLDDL FVENDYGDEV KMINLSRPIA GLAAKAVLDV FDQSLNEGKT 540 ALDFERQWQL QRLAELDVLS QRLRLVLDNT IRGQ

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MSKTLGNVID PLDTIKEYGT DALRFTIALG TAGQDLNLST ERLTSNKAFT NKLWNAGKFV  60
LQNLPSQNDA SAWENILSYK FDKVELLDKL PLPECWVISK LHLLIDAVTA SYENFFFGDV  120
GRETYEFFWG DFADWYIEAS KARLYHSGGD SVASVTQAVL LYVFENILKL LHPFMPFVTE  180
ELWQALPYRK EALIISPWPL TSLPRKSNSI KKFENLQALT RAIRNARAEY SVEPVKRISA  240
SIVANEEVTE YIVKEKEVLA LLSRLDLQNI HFTDSPPGNA DQSVHLVAGE GLEAYLPLAD  300
MIDITAEIQR LSKRLSKMQT EYDGLKARLS SPKFVEKAPE DIVRGVQEKA AETEEKITLT  360
KNQDGQRTPP FKYHRIWTEP DELLFLQGLL DCASDGFSFP KDLHLFYARF STTVSQHYTK  420
SQLSEKLRRF RRKFRVVSAR LARGLHESQL SPHDRALYDL SRKLWSSECW STSPFGNKAK  480
SDEGDDNLMV NQNQSVLDDL FVENDYGDEV KMINLSRPIA GLAAKAVLDV FDQSLNEGKT  540
ALDFERQWQL QRLAELDVLS QRLRLVLDNT IRGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-08	GeBP family protein