PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g259400.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 351aa MW: 39604.9 Da PI: 6.5181 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 25.7 | 3.7e-08 | 89 | 165 | 2 | 76 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr...traetrtgCkaklkvkkekdgkw 76 +Y++Y+++ GF v k++s++ ++ g+ + t C +egk++++++++ +++ ++ + + k++++++ +++ k Pd.00g259400.m01 89 YYKQYGRQSGFPVIKRSSTN-RDAGNLKYVTISCAREGKSKTQRSAKMQKNFddiKELANDSDDKCMVVMNWMHNLKE 165 8************9987666.58888***************9998844443333344444555566666666555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MGTRISASES KDTSHINNNS PIDQGMEESS ARLENNQHDD AVEMNFNGIE KENNGDETEN 60 NDTVMSVEEK VQDPQVGMIF DSIDEVITYY KQYGRQSGFP VIKRSSTNRD AGNLKYVTIS 120 CAREGKSKTQ RSAKMQKNFD DIKELANDSD DKCMVVMNWM HNLKEEICKH DGTCKRTEPT 180 PQSPIGKSFE PDVNGLPNAS QRILTPFPVR SKGRPPFKRR QSKTEQVIKK RQRTGRKTKY 240 RQDNTDGGIE IPAQSDVFCH TDAPPICESD NLVGTQESNN VVMLLGLTHG GHPDQLYKRP 300 LTGNITYPTI HENYFQGDQY QNWKGGSGLY NLALVQEEMI TKNSSENRSK S |