PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g258410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 339aa    MW: 36863.4 Da    PI: 9.9719
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g258410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.53e-30152207258
         CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                        p+YVNaKQy++I++RRq+Rak+  e++  ++ rkpy+heSRh hA+rRpRg+gGrF
  Pd.00g258410.m01 152 GPIYVNAKQYHGIIRRRQSRAKAVMENRA-AALRKPYMHESRHLHAMRRPRGCGGRF 207
                       69***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MQTVYFKEHE GITNPMGQLS SALSGPWWSA FGSQPSYGES CGQSKPFTME HPSSGDQLTA  60
TKLTGRGTEQ GLDKGNTNQF TIFPGDGQKS QAAISLQSSP QKYHARFELG FSQPMICAKY  120
PYMDQCYGLF STYGPQISGR IMLPLNLTAD EGPIYVNAKQ YHGIIRRRQS RAKAVMENRA  180
AALRKPYMHE SRHLHAMRRP RGCGGRFLNT KTMNNGKNGT EGTQVGDGQL FRHSGSHSSE  240
LLQSESGTLN SSKETNGSSS NISGSEVTSV CSRRDLDCFS INHLSPSVHS LSGMMDSARA  300
FGSRIARPHL VAIKGKSFLA HVRIGSPAIP CNHPARSGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.24e-58NF-YA family protein