PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g258100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 308aa    MW: 34971.1 Da    PI: 5.0366
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g258100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1071.4e-33121022101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F++k+y++++d+++++li+w + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+++ll
  Pd.00g258100.m01  12 FVMKTYQMVNDPTTDKLITWGRANNSFIVVDPLDFSQRLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQTHLL 95 
                       9********************999*****************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       +++ +++
  Pd.00g258100.m01  96 RNVGKHE 102
                       *998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MMEENNNVIA PFVMKTYQMV NDPTTDKLIT WGRANNSFIV VDPLDFSQRL LPAYFKHNNF  60
SSFVRQLNTY GFRKVDPDRW EFANEWFLRG QTHLLRNVGK HEELDDEEIV MEIARLKQEQ  120
KALEEEMENM NKRLEATERR PQQMMAFLHK VAEDPEILPR IMLEKDRTFR AQLGEKKRRV  180
MMLTSTSSSS SGMGATNSVK TEDEDDGTVG VISSSPEPGF EMESFYSTSP GTSTALERGR  240
QRRVVDRVRA AQDPYNMNPT ASGHGFGNSS NSGYGYGNRN GGAEVGYLTE EPIPAPPPYP  300
FSLLEGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.13e-90HSF family protein