PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g256560.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HRT-like
Protein Properties Length: 677aa    MW: 73771.2 Da    PI: 9.0051
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g256560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like57.42.5e-18247277131
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                       iCGv  +dGsvC+++Pv+gRKRC++HKGmRi
  Pd.00g256560.m01 247 ICGVDVGDGSVCRTPPVPGRKRCAKHKGMRI 277
                       8*****************************7 PP

2HRT-like55.21.2e-17321351131
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                       iCG il dGsvC+++Pv+gRKRC++HKGmRi
  Pd.00g256560.m01 321 ICGCILADGSVCRTPPVPGRKRCAKHKGMRI 351
                       8*****************************7 PP

3HRT-like56.54.6e-18395425131
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                       iCG+il dGs C+r+P++gRKRC eHKG+Ri
  Pd.00g256560.m01 395 ICGFILADGSSCRRHPIQGRKRCDEHKGKRI 425
                       8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 677 aa     Download sequence    
MGASDLTVAV TRLKREDCKR TKHDSHFSNW KILVGPSDWE DYSLGKEGAE RYRVHNLPKK  60
ESPGVYELGV AVLRTGLGRE IGKLDPDYIV LIWAMAAQLV ILVTVQKGPG LFADTLSRDY  120
PVVYRWAPME NKSVALKTET ELLNTFDYAW NTNINGARRP DDVLQKLKMV SSSTTRFVNI  180
AQKLEPFSPK KVGTRIESSE LLSPEDKFSA YANRESHNPL SRVFKFGRSQ PRLVLDRIGI  240
TQENTIICGV DVGDGSVCRT PPVPGRKRCA KHKGMRIDRS TRVGISNSTI DSESECSAIS  300
SIEFHDAQII NRDPVGSFTS ICGCILADGS VCRTPPVPGR KRCAKHKGMR INRSTGVGIS  360
NSTVDSESEC SAISSIGFHD AQIINRDPLE SFTSICGFIL ADGSSCRRHP IQGRKRCDEH  420
KGKRIKNPYS CYLYSTILSH SSLKRSLSFH LGNKLCSSTL LSTLLYDLFL NTFSSDPSLL  480
AAAVADLRAA HERDPACVSF SHCLLNYKGF LACQAHRVAH KLWIQSRRPL ALALHSRIAD  540
VFAVDIHPAA TIGKGVLFDH ATGVVVGETA VIGNNVSILH HVTLGGTGRA GGDRHPKIGD  600
GVLIGASATI LGNVKIGEGA KIGAGSVVLI DVPPRTTAVG NPARLVGGKE RPSQLEDVPG  660
ESMDHTSFIS EWSDYII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.13e-78HRT-like family protein