PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g256560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HRT-like | ||||||||
Protein Properties | Length: 677aa MW: 73771.2 Da PI: 9.0051 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 57.4 | 2.5e-18 | 247 | 277 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv +dGsvC+++Pv+gRKRC++HKGmRi Pd.00g256560.m01 247 ICGVDVGDGSVCRTPPVPGRKRCAKHKGMRI 277 8*****************************7 PP | |||||||
2 | HRT-like | 55.2 | 1.2e-17 | 321 | 351 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG il dGsvC+++Pv+gRKRC++HKGmRi Pd.00g256560.m01 321 ICGCILADGSVCRTPPVPGRKRCAKHKGMRI 351 8*****************************7 PP | |||||||
3 | HRT-like | 56.5 | 4.6e-18 | 395 | 425 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il dGs C+r+P++gRKRC eHKG+Ri Pd.00g256560.m01 395 ICGFILADGSSCRRHPIQGRKRCDEHKGKRI 425 8*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 677 aa Download sequence |
MGASDLTVAV TRLKREDCKR TKHDSHFSNW KILVGPSDWE DYSLGKEGAE RYRVHNLPKK 60 ESPGVYELGV AVLRTGLGRE IGKLDPDYIV LIWAMAAQLV ILVTVQKGPG LFADTLSRDY 120 PVVYRWAPME NKSVALKTET ELLNTFDYAW NTNINGARRP DDVLQKLKMV SSSTTRFVNI 180 AQKLEPFSPK KVGTRIESSE LLSPEDKFSA YANRESHNPL SRVFKFGRSQ PRLVLDRIGI 240 TQENTIICGV DVGDGSVCRT PPVPGRKRCA KHKGMRIDRS TRVGISNSTI DSESECSAIS 300 SIEFHDAQII NRDPVGSFTS ICGCILADGS VCRTPPVPGR KRCAKHKGMR INRSTGVGIS 360 NSTVDSESEC SAISSIGFHD AQIINRDPLE SFTSICGFIL ADGSSCRRHP IQGRKRCDEH 420 KGKRIKNPYS CYLYSTILSH SSLKRSLSFH LGNKLCSSTL LSTLLYDLFL NTFSSDPSLL 480 AAAVADLRAA HERDPACVSF SHCLLNYKGF LACQAHRVAH KLWIQSRRPL ALALHSRIAD 540 VFAVDIHPAA TIGKGVLFDH ATGVVVGETA VIGNNVSILH HVTLGGTGRA GGDRHPKIGD 600 GVLIGASATI LGNVKIGEGA KIGAGSVVLI DVPPRTTAVG NPARLVGGKE RPSQLEDVPG 660 ESMDHTSFIS EWSDYII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 3e-78 | HRT-like family protein |