PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g256520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 261aa    MW: 28483 Da    PI: 9.7572
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g256520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.5e-135195347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
  Pd.00g256520.m01 51 PWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 95
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDCLPTSSAS SSSPSSSRIS VDENSIQDKA SIGYLSDGLI CRAQERKKGV PWTEEEHRTF  60
LIGLEKLGKG DWRGISRNYV TTRTPTQVAS HAQKYFLRQA TLTKKKRRSS LFDMFGRSNN  120
INLSTGHPAN TNTSHYKQPL SDDHQVLPRQ HNNIIHDNSG ATLPLLELGT SVAAQNPNLD  180
NRKPDHCLAN QQLPVWIYGL IDSQMKYSSN IAASKPASSA SVVPDLELKL AAPTSPSLEQ  240
KNKSSPSPAG PLLNLGPISV T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104108KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-42MYB_related family protein