PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g256040.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 354aa MW: 40503.9 Da PI: 5.1839 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 112 | 4.1e-35 | 18 | 108 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d+e+++++sw++ g+sf+v+d+ ef++++LpkyFkh+nf+SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll Pd.00g256040.m01 18 FLNKTFQVVDDPETNSVVSWTAAGQSFIVWDSYEFSRTLLPKYFKHNNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLL 101 9****************************************************************999.........**************** PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++ikr+ Pd.00g256040.m01 102 KNIKRRI 108 *****96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MALPKPMEGL HEAGPPPFLN KTFQVVDDPE TNSVVSWTAA GQSFIVWDSY EFSRTLLPKY 60 FKHNNFSSFI RQLNTYGFKK VDPDRWEFAN EGFQGGKKHL LKNIKRRIRY NKQPTVGCVD 120 STKTGLEAEI ESLKKDQDFL KLEIMNLIQQ QKYSQHQLTA IEQRIRNSEC KNQRMLFFLT 180 KTATNSTIVQ QLMQKRVIKR ELDGSDLRKR RRLPSVQVLE SLSDWIDTSL SVDCGSQLEE 240 ELVPMQSVLA EQVAEAKVAK QNEAPLPAPM IDKAVQDFKP HVMAGTGTED MPTAYHGMSE 300 NFLEENVVFD DDEFEVDDSN FYQELEDLIG KPHDWSGYVS HCLMEQTGVI GAMP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 107 | LKNIKRR |
2 | 207 | 213 | LRKRRRL |
3 | 208 | 212 | RKRRR |
4 | 209 | 213 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-81 | HSF family protein |