PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g255730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 339aa    MW: 37683.3 Da    PI: 8.5892
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g255730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.61.8e-32182238158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d p+YVNaKQy++Il+RRq+Rakle+++kl  k+rkpylheSRh hAl+R RgsgGrF
  Pd.00g255730.m01 182 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHALNRVRGSGGRF 238
                       57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MPYQIPKDSL IELSMPTQNL DKKFFSQSSA QSIPLYTSNC MSWNPIEREI PQSSSKDASF  60
KVEFTPQVRH DAKHLGLQLL PDQGSSSTTQ TISQSQDRCN SSESGEDEIC GKGVEGQMKP  120
VYLLNNLDLM SNPSQVGYGN LMGRVPYPYA DPYFSGFLAA YGPQAMMIAP TRVPLPLDLA  180
EDGPIYVNAK QYHGILRRRQ SRAKLEAQNK LLKARKPYLH ESRHLHALNR VRGSGGRFLS  240
TKRLQQSDQN PSSSTHDVLD SVNLHQKDTQ DTESHHLGSS EFVTAVATHS DIASVSHTND  300
IFRQQDRRFS GIPSHMGGAM QFHGGLMRAG TQHCASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.14e-51NF-YA family protein