PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g255010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23947.3 Da PI: 4.9312 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6e-18 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+Wv+eIr p++ r r++lg++++ae+Aa+a +aa +l+g Pd.00g255010.m01 18 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 67 7*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVKQQQTIGK PSERNDFKYK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDS AEKAARAFDA 60 ALFCLRGRTA KFNFPDNPPE ISGGRKLSPA EIQAEAARFA NSEPPTTQHH SDHSMSELQT 120 ESQSQSPSPS VSEGSGTVPM DSDFQVTQND SFSDLFRTFG SGNYATEYGL FPGFDELNGQ 180 FFSPATTEPT TGVDYYAEDN LDGAMPAQGS FLWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 26 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 7e-60 | ERF family protein |