PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g243830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 327aa MW: 34933.4 Da PI: 6.3114

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g243830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00032	236	256	34	54
TTS-STCHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksL 54 p K + a++L +A+eYIk L Pd.00g243830.m01 236 PTFKTDTASVLHEAIEYIKFL 256 666999*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MAEEFQAGIC GSSWWNTSRH ALVASPCSVG FNDHMGSFGC PNDMVDIKAS RSSCGFDHSS 60 SSSSTPSDLN QALLLSRSGG GRAESNFHNS MLQEGVGVDE DSSSLIDGFK PMSQDFSLDQ 120 LGSSSSSGFP ITSSSSAANS YGFPSTFLQT ATALNHGNGI RSSNGLFSSS QSQFTAPASS 180 ALVHEHKPNS HNFTTKGNTN EDVQDSNSVV KKSGSSMSSC EPVFKRARIE TPSPLPTFKT 240 DTASVLHEAI EYIKFLHEQV SVLSTPYMKN GAPMQHQQGS DHKMKEAEGA KHDLKSRGLC 300 LVPISSTFPV ANETTDFWTP TFGATFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.4	1e-40	bHLH family protein