PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g243160.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 183aa MW: 20883.3 Da PI: 8.7944 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.1 | 3.5e-12 | 4 | 43 | 8 | 48 |
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed+ l++av+++G+++W+++ar +g + tl +c+srw ++l Pd.00g243160.m01 4 EDKDLIEAVERYGTHRWEAVARILG-TITLRECQSRWVNWL 43 99***********************.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MFGEDKDLIE AVERYGTHRW EAVARILGTI TLRECQSRWV NWLDPQIRRD EWSQTEDTKL 60 RELSTAQWQT ISGMFNGSRT TMACQLRHSF LLENPQRISS QEGSSSFTKK LAHHSLRLRR 120 LPSFLLTSFC IRCLQVLGKG IESHRLAQIA VVILLLCGCF SKCLIASLTT VINLLLGVLN 180 FCA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 1e-16 | MYB family protein |