PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g242630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 763aa MW: 85166.3 Da PI: 6.3984

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g242630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	39.9	8.8e-13	557	585	32	60
zf-Dof 32 fCkaCrryWtkGGalrnvPvGggrrknkk 60 +aC+r+WtkGG+lrnvPvGggr++++ Pd.00g242630.m01 557 CPRACKRHWTKGGTLRNVPVGGGRKNKRL 585 4489******************9776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MTAEVLSQPN GVVANGDLNP VSNNVTAAKN SKESERRRRR RKQKKNNKAS QAPEASAGDE 60 SDDGDAKESK VPQQIVEKVE IEYVPEKAAL NDGMDEEFRK FFEKFTFQDS AGAEEDKKDE 120 SQDGAPQKKA DSDADEDEQD NQQKERGGVS NKKKKLQRRM KIAELKQICI GVRKGNFCRG 180 AAVTTMEPGL GKRGIEKQPF QLPDFIAATG IEKIRQAYIE KEDSKKLKQK QRERMQPKMG 240 KMDIDYQVLH DAFFKYQTKP KLTTLGDLYH EGKEFEVKLR EMKPGMLSHE LKEALGMPDG 300 APPPWLINMQ RYGPPPSYPH LKIPGLNAPI PPGASFGYHA GGWGKPPVDE YGQPLYGDVF 360 GVQQQDQPNY EEEPVDKTKH WDSLSSTPTG VETPDVIDLR KQQRKEPERP LYQVLEEKEE 420 KIAPGTLLGT THTYVVGSGT QDKAGAKRVD LLRGQKADKV DVTLQPEELE LMENVLPAKY 480 EEAREEEKLR SQREDFSDMV AEVLRVFRVM GLSTKQVSSD GLDWSQASLL QGQTFQLPKS 540 PSAMRRQQQQ QPEPLKCPRA CKRHWTKGGT LRNVPVGGGR KNKRLKKSSN STSASAAATT 600 TTTNSAAIDQ TDHQEQKPMS QVFYQALPQQ NLDNTIIFSS SSSPGLSAST LPFLHQSRNL 660 SFPFSSSIST TSSSFDTNLS SISTSLQSSN VYNYAAAAAE DQFKAMEEPT ITSIMPNISQ 720 PNWKVPTSSN AMDVYSNDWN WEDIETLVST DLNLPWDGSD IKP

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MTAEVLSQPN GVVANGDLNP VSNNVTAAKN SKESERRRRR RKQKKNNKAS QAPEASAGDE  60
SDDGDAKESK VPQQIVEKVE IEYVPEKAAL NDGMDEEFRK FFEKFTFQDS AGAEEDKKDE  120
SQDGAPQKKA DSDADEDEQD NQQKERGGVS NKKKKLQRRM KIAELKQICI GVRKGNFCRG  180
AAVTTMEPGL GKRGIEKQPF QLPDFIAATG IEKIRQAYIE KEDSKKLKQK QRERMQPKMG  240
KMDIDYQVLH DAFFKYQTKP KLTTLGDLYH EGKEFEVKLR EMKPGMLSHE LKEALGMPDG  300
APPPWLINMQ RYGPPPSYPH LKIPGLNAPI PPGASFGYHA GGWGKPPVDE YGQPLYGDVF  360
GVQQQDQPNY EEEPVDKTKH WDSLSSTPTG VETPDVIDLR KQQRKEPERP LYQVLEEKEE  420
KIAPGTLLGT THTYVVGSGT QDKAGAKRVD LLRGQKADKV DVTLQPEELE LMENVLPAKY  480
EEAREEEKLR SQREDFSDMV AEVLRVFRVM GLSTKQVSSD GLDWSQASLL QGQTFQLPKS  540
PSAMRRQQQQ QPEPLKCPRA CKRHWTKGGT LRNVPVGGGR KNKRLKKSSN STSASAAATT  600
TTTNSAAIDQ TDHQEQKPMS QVFYQALPQQ NLDNTIIFSS SSSPGLSAST LPFLHQSRNL  660
SFPFSSSIST TSSSFDTNLS SISTSLQSSN VYNYAAAAAE DQFKAMEEPT ITSIMPNISQ  720
PNWKVPTSSN AMDVYSNDWN WEDIETLVST DLNLPWDGSD IKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	41	RRRRRR
2	36	42	RRRRRRK
3	36	43	RRRRRRKQ
4	37	45	RRRRRKQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-06	Dof family protein