PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g242260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 196aa MW: 22292.4 Da PI: 8.7203 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 97.8 | 1e-30 | 19 | 118 | 2 | 102 |
HHHHHHHHHC......TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXX CS HSF_DNA-bind 2 Flkklyeile......deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksF 86 Fl+k+y++le ++ k+++sw+++g+ f+v+ + ef++ +LpkyFkh+nf+SF+RQLn+Y gFkk++ ++ weFkh++F Pd.00g242260.m01 19 FLSKTYDLLEegaaeeGDSGKKIVSWNAEGSGFIVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYkqGFKKTSPKQ---------WEFKHEKF 102 9*********66555444899********************************************66677777666.........******** PP XXXXXXXXXXXXXXXX CS HSF_DNA-bind 87 kkgkkellekikrkks 102 +kg +++l +i rkk Pd.00g242260.m01 103 QKGCRHMLVEITRKKC 118 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MAATTSSGQS PRTRSPAPFL SKTYDLLEEG AAEEGDSGKK IVSWNAEGSG FIVWSPAEFS 60 ELLLPKYFKH NNFSSFIRQL NTYKQGFKKT SPKQWEFKHE KFQKGCRHML VEITRKKCEP 120 SAFPVYLKAS EESGSGNTAV AAAEENNCLL LMEENKNLRK QKLELQMQIS QFKALEMKLL 180 DCLAQNMEDH QNKVRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 1e-37 | HSF family protein |