PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g241970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 671aa MW: 76955.6 Da PI: 9.4497 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.6 | 3.3e-11 | 9 | 60 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 r+ + +E++RR++++ +++L +l+P++ +s+ s + L Av+YIk+Lq Pd.00g241970.m01 9 RADRKTIEKNRRNQMKALYSKLNSLVPHQ---RSREvTSLPDQLDDAVNYIKKLQ 60 667789**********************9...88998*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 671 aa Download sequence |
MEHCPSSSRA DRKTIEKNRR NQMKALYSKL NSLVPHQRSR EVTSLPDQLD DAVNYIKKLQ 60 TNLEKMREKK ECLMGTEKSG NNNAGFVGGE VMGGLKSPQI EIEIQEMGSA LQVVLITGLD 120 YQFMFNESIR VLHEEGADIV NASFSIVEDT IFHTIHSKIG ESAPGPVAAR ISERLKKLLG 180 RIADWTRTFN NPARSKNPSD SVFDFSNDES FPASADDDAS FRLVDGKPPP RPRFGPKWRF 240 QQQRQLPHRR DEEVEAKKRE AEKERARRDR QYNMNRSNVN VPRREAAVFK SSVDIQPEWN 300 MLDQIPFSTF SKLSFSVPEP EDLLLCGGLE FYDRSCDRIT PKNERRLERF KNRNFFKVTT 360 TDDPVIRRLA NEDKATVFAT DTILSTLMCA PRSIYSWDIV VQRVGNKLFF DKRDGSQLDL 420 LSVHETSQEP LPEAKDDINS AYSLSVEAAY INQNFSQQVL IRDGNKVTFD EPNPFANEGE 480 EVASVAYRYR RWKLEEGMYL VARCEVQSVM EVNNQRSFLT LNALNEFDPK YSGVDWRQKL 540 ETQRGAVLAT ELKNNANKLA KWTAQALLAS ADLMKLGYVS RVHPRDHFNH VILAVVGYKP 600 KEFASQINLN TNSMWGIVKS IVDLCMKLNE GKYVLVKDPS KPQRIRRLRI LKLKGLKPIL 660 QLVRKETWLQ L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 5e-45 | bHLH family protein |