PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g241730.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 106aa    MW: 11770.1 Da    PI: 10.1405
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g241730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP136.29.7e-4325101278
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       Cq+++C+adls+ak+y+rrhkvC vh+kap+v v g++qrfCqqCsrfh+lsefD++krsCrrrLa+hnerrrk+++
  Pd.00g241730.m01  25 CQADDCNADLSDAKQYYRRHKVCGVHAKAPAVRVGGVQQRFCQQCSRFHSLSEFDDNKRSCRRRLAGHNERRRKTSS 101
                       **************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MVNSATTTPN KRGSGAGGSM ARPSCQADDC NADLSDAKQY YRRHKVCGVH AKAPAVRVGG  60
VQQRFCQQCS RFHSLSEFDD NKRSCRRRLA GHNERRRKTS SECHGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.18e-41SBP family protein