PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g241640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 292aa MW: 31948.8 Da PI: 9.912 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 91 | 136 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa++ Pd.00g241640.m01 91 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAR 136 69*******.**********8...557*********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MSDKNDTHVF HQNRWARWLE DPPLSLKTRK KPTLVGVPLG ERGEQLLVQE RERFKGRIKA 60 KEGQAPCNMA PREKTATAVR ANGNGNVKEV HFRGVRKRPW GRYAAEIRDP GKKSRVWLGT 120 FDTAEEAARA YDAAARDGSN NQSPSQSSTV ESSSREPPAL MVDSSPLDLN LAQGVSSGGF 180 GSGPMRFPFQ QVPSVGAVIG VPASAAAAAN HVLYFDSVFR AGMVKSHQFH QRLRFDHHNL 240 QQHDFHAYGG GGVFACAAQS DSDSSSVIDL NNHDLPRRGL LDLNLPPPPE LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-20 | ERF family protein |