PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g241540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HB-other | ||||||||
Protein Properties | Length: 1737aa MW: 194971 Da PI: 4.9833 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.9 | 1.7e-18 | 33 | 88 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps++ r+eL++klgLt+rq ++WF+ rR k+kk Pd.00g241540.m01 33 PKRQMKTPFQLETLEKAYALETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKK 88 69****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1737 aa Download sequence |
MEGASEGENP TKNHENNNSN GKFNNSSEGQ SKPKRQMKTP FQLETLEKAY ALETYPSEAI 60 RAELSEKLGL TDRQLQMWFC HRRLKDKKEG GPAKKQRKSV PTLPEPPIDD LAHGSEPGSD 120 YGSGSGSGSS PFGHAELRNV VSRSGADDMP MRRRYYESPQ SILELRAIAC VEAQLGEPLR 180 EDGPVLGVEF DRLPPDAFGA PIVAEQQKRA AHALEGKYER HDAKPNKATP RALHEYPFLQ 240 DHSSIRSDAY GQAAQSHFQD SPIDGPSARA SSFAERQAVA FPSPGDDGCV PQRDSFTNVR 300 VNTQFSDPPT VAPENSNALS DGQINDSMLR MERKRKSEEA RIAKEVEAHE IRIRKELEKQ 360 DILRRKNEER MRKEMERHDR ERRKEEERLM RERQREEERS KREQKREIER REKFLQKEYI 420 RAEKRRQKEE LRKEREAVRR KAALEKATAR RLAKESMELI EDEQLELMEL AAASKGLSSI 480 ICIDLDTLQN LDAFRDSLAA FPPKSVQLKR PFAVQPWINS EENIGNFLMV WRFLITFADV 540 LELWPFTLDE FVQAFHDYDS RLLGEIHVAL LRLIIKDIED VARTPSTGLG VNQNGAANPG 600 GGHPQIVEGA YAWGFDIRNW QQHLNLLTWP EIFRQLALSA GFGPQLKKRS TAWSYSPDND 660 EGKGCQDAIS NLRNGSAAEN AFAIMQEKGL LAPRKSRHRL TPGTVKFAAF HVLSLEGNKG 720 LTVLELADKI QKSGLRDLTT SKTPEASISV ALTRDTKLFE RIAPSTYRVR AAYRKDPADA 780 EAILSAARKK IQIFENGFLA AEDADDVERD DADEVENDEV ERDEDFECDE VDDDPEVDDL 840 ATPSVAKKSP DDYNEVITFS ENGKDLCNDV ALNVQNEFEK DVSSSPVSGS KDANCPSASS 900 KQCVSGADIS ASNLDQENME IDESKSGESW VQGLTEGEYS DLSVEERLNG LVTLIGVANE 960 GNSIRVVLED RLEAANALKK QMWAEAQLDK SRLKEENVGK LDFPSFVGGK SETQVIGVED 1020 GQSPVRDVDN RNIEASPGTA ENQKSIHGSQ GVQNQLNGLP VERTLGAQDI SMGPDNFLSQ 1080 QLAYASKRSR SQLKSYIAHR AEEMYAYRSL PLGQDRRHNR YWQFVASASS NDPGSGRIFI 1140 ELNNGSWRLI DTEEAFDALL TSLDTRGIRE SHLRLMLQKI EASFKENVRK TAHCPNSAGP 1200 SKNRVKNEAD MDSSPDCPSG FDSPGSTVCA LNSDTAETSS SFRIELDRNE AEKRAALRRY 1260 QDFQKWMWKE CFSSSTFCAM KYAKKRCRSL FDVCDFCLSC YYFEDSHCAF CHQTFSAFYA 1320 NFDFSEHVIQ CKEKRKLEPW DSHIPCTSLP LARRLLKALI AHVEVSIPPE ALQSFWTEDR 1380 RRTWGGKLHA SSSTEELLQI LTLLETAVKR DFLSSNFAAT EELLGTGKQS EAFVPDFLDS 1440 GSVPLLPWIP HTTAAVALRL HEMDSSITHI QLEKAEPNGD KEVKEYLKLP MRLAPLKESE 1500 QTEVGHNEYI REENNTHLKS ARNSFRRGRG GREQGRGKKW QRKVNNSKSG ASRQKGSGNL 1560 SQGFRPVGKR TQGQGSARGR RTVRKRRTKD RAVEGTPLGR MTDVRSSPES GGESPRNLGE 1620 EWDDEKIDMI QMKGDEQGEG YEQAEALESE DDDQAVGYEQ GNWETGFDGT SSGWHEGLLE 1680 ASDEDMDASE DDNNGIEEVR DEDSEGDVDM SDASDEIQNK ITNDDGSDSA VSDDYSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 89 | RRLKDKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 0.0 | HB-other family protein |