PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g241250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 264aa MW: 29538.4 Da PI: 5.3136 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.7e-19 | 126 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + k +r++lg+f taeeAa a+++a+++++g Pd.00g241250.m01 126 HYRGVRRRP-WGKYAAEIRDsT--R-KGARVWLGTFETAEEAALAYDKAALRIRG 176 8********.**********32..2.24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MAVHSDPHAA EVASEAILEN VWASFIGVDG VKEEAKKTTE LSKPWKELPP LDGREGSMEI 60 LERLPSLGRW ISMGTEAWQE LLDSCVVPGH NMEVSSNVKL EGNGATNSEF EAKVEKRREK 120 VEIMKHYRGV RRRPWGKYAA EIRDSTRKGA RVWLGTFETA EEAALAYDKA ALRIRGSKAN 180 LNFPLETVAE AMGLDCFNIC SSTNVSNSRK RALREWEESV EAMTDGKPAL KRKASMKNML 240 GDEFDVFEFQ DLGSEHLDSL LSSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 2e-41 | ERF family protein |