PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g241230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 360aa    MW: 40759.7 Da    PI: 5.9835
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g241230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.44.3e-2278162288
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                       fYn+YA+ vGFs+r+sk +k+ + g+  +r fvCs egkre++k +  + +++raetr gC a++k++ + ++k++vt+++ eH+H 
  Pd.00g241230.m01  78 FYNAYAYGVGFSIRRSKFHKE-KCGKLRDRLFVCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 162
                       9****************9998.6677******************99.9999***********************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MNGENNYRDD DGTQANLKLI FETGVDFNAF VGSESNEEKL SETTQGNENI ELIHSNMQKK  60
LIPVIGMEFE TEEEAFIFYN AYAYGVGFSI RRSKFHKEKC GKLRDRLFVC SAEGKREKNK  120
CDGSVKSHRA ETRFGCLARM KISCRLNDKY CVTEFVPEHT HVTSSPCKTH FFRSHRNMSL  180
AQIVEADMAD SSGIAPKATL ELLSRQAGGR QNLGFIPVDY KNYLRSKRTR EMRLATRASE  240
SKDAYETAIL GLNNTLRDVD ACLKKKASQE PTQEPDSHNE TIHMPTQSQA TMDISQQYYI  300
RTHNTLSNYQ QGPTSMMNLL QAELPQEEEL SLLSSEGLDL LSSELTCSAK THDMDVQDVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-26FAR1 family protein