PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g241120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 276aa    MW: 31326.5 Da    PI: 6.29
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g241120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP104.61.6e-32992442130
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssss 81 
                       +++k rhsk++T++g+RdRR Rlsa++a++f+d+ d+LG+d++sk+i+WL+++ak+ai +l +              +            s +
  Pd.00g241120.m01  99 TARKERHSKVYTSKGPRDRRFRLSAPTAIQFYDVLDRLGYDRPSKAIDWLIEKAKAAIEALSEPelpgkeydctninN------------SAQ 179
                       789************************************************************966655555543321............222 PP

               TCP  82 asnsssg..............kaaksaakskksqksaasalnlakesr.......akarararertrekm 130
                       + ++ +g                ++++ ++ +s k++   l+ +   +       ++a   a   t +km
  Pd.00g241120.m01 180 QTEQDIGeesmrqfqhhqrsyGGEPEKLNNVNSFKETV--LDHH---QlssmnyaEEALNSASSLTDSKM 244
                       22222222222222211112222222222222222222..1111...01222222444444555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MLQQRGSKNE DQDQPEDVQE EEQQSQKRLI GQYQHVEEPP NYGPLNGKML NTHIAKSSRK  60
SCYSMSSSSS HLASEEAEIN NARYGKIVKV HGGHIVRSTA RKERHSKVYT SKGPRDRRFR  120
LSAPTAIQFY DVLDRLGYDR PSKAIDWLIE KAKAAIEALS EPELPGKEYD CTNINNSAQQ  180
TEQDIGEESM RQFQHHQRSY GGEPEKLNNV NSFKETVLDH HQLSSMNYAE EALNSASSLT  240
DSKMEVPWFQ SLMAWNYNAG DGGEGCPFNS SHVYLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.13e-38TCP family protein