PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g240910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 285aa MW: 30629.7 Da PI: 9.1543 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.6 | 7e-11 | 96 | 142 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr l+P +K++Ka+ L ++ +k+L Pd.00g240910.m01 96 KNHSEAERRRRERINAHLSTLRGLVPCT-----EKMDKAALLATVISQVKEL 142 58*************************8.....7********9999888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MEGMTKPTRS VTATTTATII NTLLSNKAAL VHRSEYSSLF DPFTHGSSGF GGALRGGGSV 60 LPHSLVLDSE KGELVKAPAR VGKKGVSEAK ALAALKNHSE AERRRRERIN AHLSTLRGLV 120 PCTEKMDKAA LLATVISQVK ELKKDALESS KGFLIPVDAD EVQVEPYDTG AGDGTISVRA 180 SVCCEYRSEL LSDLREALDS LHLKMVKADI ATLGNRVKNV FVFTSCKERS NDADADAFQL 240 LASSVHQALS SVLDKASASP EYSPRTTLLS KRRRVSYFDT SSSSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 107 | ERRRRE |
2 | 271 | 275 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 5e-35 | bHLH family protein |