PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g235110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 450aa    MW: 48684.2 Da    PI: 4.6886
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g235110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.2e-06284309530
                       HHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   5 hnerErrRRdriNsafeeLrellPka 30 
                       h+++Er RR++i +++ +L+el+P++
  Pd.00g235110.m01 284 HSIAERLRREKIAERMKNLQELVPNS 309
                       99**********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MDNYLNQFFS SSSWSDVDVK ERSSWGCCES GQPNEMLLNS AGVDEDDNNS SPTYLTNSNH  60
SMESLAAQDA SSIVHDLESD AQDDGKNFKP NLSNGKVDGS FKVENPGLQY DVDIVTPCSL  120
ASLEQLPLNG NMVRTYLSAI EPENVVCNNR ESSIFERFNG DFETLSSISQ LWPLQSYEGV  180
PSSLSPGMGQ HRMCSFGLKG EYGDNGTYAN ANDPNNLAAL VTREGKQDLQ NYPLPSFASG  240
PQITMTMSGL QSLQQATSTT PSAECTGTGK PRMRARRGQA TDPHSIAERL RREKIAERMK  300
NLQELVPNSN RVLSMSRVGA AGAVIPLITD TQQAKGANGS SLLPSVGQVT DISFNEIALE  360
QVVRLMESDV TKAMQHLQSK GLCLMPIALA DAISTEKKSS SSPASASDDW KKTGTEFGNF  420
RHGELNLAAS QLLVLVHSYS LVVCCGKSLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.12e-34bHLH family protein