PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g234810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 217aa    MW: 24207.5 Da    PI: 4.9378
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g234810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-181867255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  Pd.00g234810.m01 18 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 67
                      7*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVKQQQTIGK PSERNDFKYK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDS AEKAARAFDA  60
ALFCLRGRTA KFNFPDNPPE ISGGRKLSPA EIQAEAARFA NSEPQTTQHH SDHSMSELQT  120
ESQSQSQSPS PSVSEGSGTV PMDSDFQVTQ NDSFSDLFRT FGSGNYATEY GLFPGFDELN  180
GQFFSPATTE PTTGVDYYAE ENLDGAMPAQ GSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12026KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-60ERF family protein