PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g232600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 585aa MW: 63887.1 Da PI: 7.6184

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g232600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	4e-09	399	446	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g232600.m01 399 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 446 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MENEFFLNAG IPPPLHFVQT SSMPAWRSSF STAMDIQATA TADRNCSSEQ SPDRFYNPNW 60 DKSTDQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG 120 IQANTYMGRN RNGNGNASTN TSCYSTPLNS PPKLSLPIMD HHLKKEKLPN MGKPMPLNSS 180 VAEFSADPGF AERAAKFSCF GSRSFNGRTT QLGMNNNNNS SNNNNTELPY RSNAIMGNGK 240 LPRVSSSPAL KALGSQTGLQ EKMNSLLQDR NELPISREES TLSEQNPNGE TGLVGSNSMD 300 LNSRKRKSVS KGKAKEPPPI SSPSPIATKG AELNDNSNAK RSKPNENNGN DQNGSVKAEE 360 DTKGSTSSDE KQTKTGPKPP EPPKDYIHVR ARRGQATDSH SLAERVRREK ISERMKLLQD 420 LVPGCNKVTG KALMLDEIIN YVQSLQRQVE FLSMKLASVN TRLDFNMDAL MSKEIFQQNN 480 SLPQHPIFPL DSSAQAIYGH QRQQNPALQN NISNGAVDPL DTSLCQSLGM QLPPLSGFNS 540 EGIPQFPAFG EDDLQTIVRM GYGQNPNRET ELDGSNQVSH MKIEL

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MENEFFLNAG IPPPLHFVQT SSMPAWRSSF STAMDIQATA TADRNCSSEQ SPDRFYNPNW  60
DKSTDQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG  120
IQANTYMGRN RNGNGNASTN TSCYSTPLNS PPKLSLPIMD HHLKKEKLPN MGKPMPLNSS  180
VAEFSADPGF AERAAKFSCF GSRSFNGRTT QLGMNNNNNS SNNNNTELPY RSNAIMGNGK  240
LPRVSSSPAL KALGSQTGLQ EKMNSLLQDR NELPISREES TLSEQNPNGE TGLVGSNSMD  300
LNSRKRKSVS KGKAKEPPPI SSPSPIATKG AELNDNSNAK RSKPNENNGN DQNGSVKAEE  360
DTKGSTSSDE KQTKTGPKPP EPPKDYIHVR ARRGQATDSH SLAERVRREK ISERMKLLQD  420
LVPGCNKVTG KALMLDEIIN YVQSLQRQVE FLSMKLASVN TRLDFNMDAL MSKEIFQQNN  480
SLPQHPIFPL DSSAQAIYGH QRQQNPALQN NISNGAVDPL DTSLCQSLGM QLPPLSGFNS  540
EGIPQFPAFG EDDLQTIVRM GYGQNPNRET ELDGSNQVSH MKIEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	303	308	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-113	bHLH family protein