PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g230350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 248aa MW: 27698.7 Da PI: 4.9149 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 45.4 | 1.3e-14 | 83 | 124 | 29 | 71 |
E2F_TDP 29 evakeLvse.dvknkrRRiYDilNVLealnliekkekneirwkg 71 e a++L se + kn+ RR+YD+lNVLeal++i++ k+ei+w+g Pd.00g230350.m01 83 ETATSL-SEfNDKNIPRRVYDALNVLEALDIITR-VKKEIKWNG 124 344555.337999*********************.9******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDDNYSGDSF GGFFQKHSSA ESSVSASLNN AAAFGSARRS ITFDHDDTGT ADVETECLSA 60 SNNSDGVQLA DYIMSELAGN DSETATSLSE FNDKNIPRRV YDALNVLEAL DIITRVKKEI 120 KWNGIPDRKM DLEGMKAECV KMMNRIGRKT AYLKDLEEQT SRDAAVEIEI SEDKHMVHFD 180 FNSAPFFLHD DTYILKLLRR HQPPERTNVS QNSSVYPPSP CPSIVSGGAR PFYWNSGTET 240 RNSKMNRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 3e-37 | E2F/DP family protein |