PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g230130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 327aa    MW: 36161.5 Da    PI: 9.0083
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g230130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like64.91.4e-20116169155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SHLQkYR+
  Pd.00g230130.m01 116 KKRCEWKKSLGENFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHLQKYRI 169
                       689******************.********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MASKSVLIVA LLFSVLILCL QGTYADRIQG WEGGHARFYD GAGAFASGAI GGGFGNGNWD  60
SQGYGFSSGS CYELKCDSGP IWCLTGDEEK QEKRAKRGRK RSREGDDEER TAAPRKKRCE  120
WKKSLGENFM LAITHIGLDN ATPKRILEFM NEPDLTIKNV ASHLQKYRIY LKQLKVGVAG  180
DEDMRERLRR SSFALGHLEL FFNNNERDQH HSQLLKQQQM GTSIGSTFQP SAGIGSTLPL  240
TAAASNSHGS IQFSNDQQSS NSSRSIPQLI GLGQSSLLNN NPANFLRQQP TLGNRNGDQL  300
FCQENRLAAF GMQQPSNNFE NGEHPRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199118RKRSREGDDEERTAAPRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.16e-20ARR-B family protein