PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g229910.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 360aa MW: 38938.3 Da PI: 9.9134

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g229910.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	139	1.4e-43	58	135	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls+ak y++rhkvC vhsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ Pd.00g229910.m02 58 RCQVEGCQVDLSDAKAYYSRHKVCGVHSKTPMVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 135 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGHCQSLNGL KFGRKIYFED AGLGAPYKSG SAGSSSSGAT PPKKQRGVNL AQPGQPPRCQ 60 VEGCQVDLSD AKAYYSRHKV CGVHSKTPMV IVAGLEQRFC QQCSRFHQLP EFDQGKRSCR 120 RRLAGHNERR RKPQPGSVLS ARFGRLSSSI YENSSRVGSF LMDFTAYPRH SGRDAWATTR 180 TSERVPGNQN SNDTGKFLQH PWQSNSEITP SGLYLQGSAG GTSYPGPGIP PGECVTGVTD 240 SSCALSLLSS QPWGSRNRVS GVGMNTVINT QGPPVGQPIT HAGTSNHFPT TSWGFKGNAG 300 SSSHEMLPDL GLGQMSQPPL STQYSGVLEL SQQSSRRQQQ MELGHTRGYD TSSQHIHWSL

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGHCQSLNGL KFGRKIYFED AGLGAPYKSG SAGSSSSGAT PPKKQRGVNL AQPGQPPRCQ  60
VEGCQVDLSD AKAYYSRHKV CGVHSKTPMV IVAGLEQRFC QQCSRFHQLP EFDQGKRSCR  120
RRLAGHNERR RKPQPGSVLS ARFGRLSSSI YENSSRVGSF LMDFTAYPRH SGRDAWATTR  180
TSERVPGNQN SNDTGKFLQH PWQSNSEITP SGLYLQGSAG GTSYPGPGIP PGECVTGVTD  240
SSCALSLLSS QPWGSRNRVS GVGMNTVINT QGPPVGQPIT HAGTSNHFPT TSWGFKGNAG  300
SSSHEMLPDL GLGQMSQPPL STQYSGVLEL SQQSSRRQQQ MELGHTRGYD TSSQHIHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-70	SBP family protein