PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g229910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 301aa    MW: 32635.4 Da    PI: 10.4749
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g229910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP48.32.6e-1546764878
                      SEEETTT--SS--S-STTTT-------S--- CS
               SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78
                       fh+l efD++krsCrrrLa+hnerrrk+q+
  Pd.00g229910.m01 46 GFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 76
                      6***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MPKLTIPGTK SVACTLRPPW SLLLVLNRGF ANSVAGLVGY LNRMNGFHQL PEFDQGKRSC  60
RRRLAGHNER RRKPQPGSVL SARFGRLSSS IYENSSRVGS FLMDFTAYPR HSGRDAWATT  120
RTSERVPGNQ NSNDTGKFLQ HPWQSNSEIT PSGLYLQGSA GGTSYPGPGI PPGECVTGVT  180
DSSCALSLLS SQPWGSRNRV SGVGMNTVIN TQGPPVGQPI THAGTSNHFP TTSWGFKGNA  240
GSSSHEMLPD LGLGQMSQPP LSTQYSGVLE LSQQSSRRQQ QMELGHTRGY DTSSQHIHWS  300
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.14e-35SBP family protein