PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g229800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 867aa MW: 96567.6 Da PI: 6.2776

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g229800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	34.8	3.2e-11	114	135	2	23
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 dDgy+WrKYGqK++k+s++pr Pd.00g229800.m01 114 DDGYKWRKYGQKSIKNSPNPRT 135 8********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 867 aa Download sequence
MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP 60 TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR 120 KYGQKSIKNS PNPRTTFLHE TVPLGNACIS GVDGELGLLR GYLTYNGAGK QLVSNTYLSN 180 FKSFLTNPRI RRFFSSQGHE KKNYENYYPK NKKEIPKGNG QKSGSKEGSN AGDQGNTWEL 240 FIPWHQIIGP IMFLGFVFTS LLLNPQQAKE ISFQEFKNKL LEPGLVDHIE VANKSVAKVY 300 VRSSPHDKKQ SGDDAVKGPA DGSSSGGNTT QYKYYFNIGS VESFEEKLEE AQEALGFDRH 360 DFVPVIYVSQ INWFQELMRY GPMALLLGAL WFMSRKMPSI GGPGGKGGRG IFNIGKAQIT 420 KLDKNAKNKV FFKDVAGCDE AKQEIMEFVH FLKNPKKYEE VRSLFQEARQ CAPSIIFIDE 480 IDAIGRARGR GGFSGGHDER ESTLNQLLVE MDGFGTTAGV VVLAGTNRPD ILDKALLRPG 540 RFDRQITIDK PDIKGRNQIF QIYLNKLKLD LEPSYYSERL AALTPGFAGA DIANVCNEAA 600 LIAARNESPK ITMKHFEAAI DRVIGGLEKK NKVVSKLERR TVAYHESGHA VAGWFLEHAE 660 PLLKVTIVPR GTAALGFAQY VPNENLLMTK EQLFDMTCMT LGGRAAEQVL LGKISTGAQN 720 DLEKVTKMTY AQVAVYGFSD KVGLLSFPQR DDAFEMAKPY SSKTGAIIDS EVREWVAKAY 780 VRTIELIEEH KEQVGQIAEL LLEKEVLHQD DLVRVLGERP FKSNEPTNYD RFKEGFQEED 840 KEPKETTEGG NVDDGRSPPV QPDVVPA

Sequence ? help Back to Top

Protein Sequence Length: 867 aa Download sequence

MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP  60
TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR  120
KYGQKSIKNS PNPRTTFLHE TVPLGNACIS GVDGELGLLR GYLTYNGAGK QLVSNTYLSN  180
FKSFLTNPRI RRFFSSQGHE KKNYENYYPK NKKEIPKGNG QKSGSKEGSN AGDQGNTWEL  240
FIPWHQIIGP IMFLGFVFTS LLLNPQQAKE ISFQEFKNKL LEPGLVDHIE VANKSVAKVY  300
VRSSPHDKKQ SGDDAVKGPA DGSSSGGNTT QYKYYFNIGS VESFEEKLEE AQEALGFDRH  360
DFVPVIYVSQ INWFQELMRY GPMALLLGAL WFMSRKMPSI GGPGGKGGRG IFNIGKAQIT  420
KLDKNAKNKV FFKDVAGCDE AKQEIMEFVH FLKNPKKYEE VRSLFQEARQ CAPSIIFIDE  480
IDAIGRARGR GGFSGGHDER ESTLNQLLVE MDGFGTTAGV VVLAGTNRPD ILDKALLRPG  540
RFDRQITIDK PDIKGRNQIF QIYLNKLKLD LEPSYYSERL AALTPGFAGA DIANVCNEAA  600
LIAARNESPK ITMKHFEAAI DRVIGGLEKK NKVVSKLERR TVAYHESGHA VAGWFLEHAE  660
PLLKVTIVPR GTAALGFAQY VPNENLLMTK EQLFDMTCMT LGGRAAEQVL LGKISTGAQN  720
DLEKVTKMTY AQVAVYGFSD KVGLLSFPQR DDAFEMAKPY SSKTGAIIDS EVREWVAKAY  780
VRTIELIEEH KEQVGQIAEL LLEKEVLHQD DLVRVLGERP FKSNEPTNYD RFKEGFQEED  840
KEPKETTEGG NVDDGRSPPV QPDVVPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	4e-29	WRKY family protein