PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g227410.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 29105 Da PI: 4.5939 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.2 | 1e-06 | 193 | 236 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + r RR++i ++ +eL +l+P K++ ae+L+ A +++k+L+ Pd.00g227410.m01 193 VAARERRRKITEKTQELGKLVPGG-----SKMNTAEMLTAAYNFVKYLR 236 56799*****************95.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MALSSFSSRE TVPPQSFGSE MTNCFQPNIE AELLTAEELL KYYQLDYNCS ILPNNLFLDD 60 HPCPDPYNLL NLENYHPDTT SDDHLLLPHL TTSDMFPQLD FYPYPYPKRQ KCFQDFVYPE 120 FTPANFYDAF APDSCPLPEL LPAPGVFATP LLTFNQHPEE TVTDSNKLKV NDYEIGFTAK 180 KKVEEKCVSA QSVAARERRR KITEKTQELG KLVPGGSKMN TAEMLTAAYN FVKYLRAQVG 240 ILEFMGSFQV FCSVSL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 180 | 201 | KKKVEEKCVSAQSVAARERRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30670.1 | 5e-19 | bHLH family protein |