PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g225290.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 323aa MW: 36088.1 Da PI: 8.9066 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.4 | 5.3e-13 | 250 | 295 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq Pd.00g225290.m01 250 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 295 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MDSNSHQNLH SQEHQTHQPN SGLLRFRSAP SSLLANFNEN SDLGLIGKNP IDGSDSERLF 60 SRFANYTHSN DSDSWPSSFQ ELDNKSTVTA TEAAVTESRM SSQQQGYSGL PPHYPRQSSF 120 NGSYGLVGSA AMNHHTQPKA VHSNLVRQSS SPAGLFSNSS VQNGFQFGTW NDSSNFAENL 180 GGMRRDQDND GKLFSVPQNG ELENRIHLLS HHLSLPKTSA EIAMEKFLQL QDSVPCKVRA 240 KRGCATHPRS IAERVRRTRI SERMRKLQEL VPNMDKQTNT ADMLDLAVEY IKDLQKQFKT 300 LSDVRANCKC LNMQKKPVSN QIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 1e-102 | bHLH family protein |