PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g225240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 351aa MW: 38751.7 Da PI: 6.4452 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.2 | 1.4e-08 | 196 | 243 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a +L + +++++sLq Pd.00g225240.m01 196 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243 79************************9....888999999999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MDPTGATVPG SILPGPEFES LQFREEIHRL MAVPPENASS FTALLELPPT KAMELLHLSP 60 EANSTPTPAA ISGEARVQHP FNSSLTFPTN PALIERAAKF SIFGGEGAPE TSSMPSNSGA 120 DLEKVKTEPV ETDSNPNSSQ LTLDATKNNQ RSSAKRKERE KKVKVSTKKS KSEIKEDADK 180 VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ 240 SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVPINGNRQP 300 YHQQWHFDTH QPGWGREEET HTFITPETSL ISCDSSANSA TLQTSHLKME M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42300.1 | 1e-103 | bHLH family protein |