PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g225240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 351aa    MW: 38751.7 Da    PI: 6.4452
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g225240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08196243455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  Pd.00g225240.m01 196 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243
                       79************************9....888999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDPTGATVPG SILPGPEFES LQFREEIHRL MAVPPENASS FTALLELPPT KAMELLHLSP  60
EANSTPTPAA ISGEARVQHP FNSSLTFPTN PALIERAAKF SIFGGEGAPE TSSMPSNSGA  120
DLEKVKTEPV ETDSNPNSSQ LTLDATKNNQ RSSAKRKERE KKVKVSTKKS KSEIKEDADK  180
VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ  240
SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVPINGNRQP  300
YHQQWHFDTH QPGWGREEET HTFITPETSL ISCDSSANSA TLQTSHLKME M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.11e-103bHLH family protein