PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g224840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 285aa    MW: 32005.9 Da    PI: 6.0619
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g224840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-192978255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a++ a+++l+g
  Pd.00g224840.m01 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDDAARRLYG 78
                      69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MENCRKSPLK PWKKGPTRGK GGPQNASCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD DAARRLYGPD AFLNLPHLQA NSNPALKSQK FKWFPSQNFI SMFPSCGLLN  120
INAQPSVHVI HQRLQELKQN GVLGQTTPSS SSSSCDSKPE VHIISDKTQI GNVAEKEKDV  180
EISSEKMIED NREKPQIDLN EFLQQLGVLK KERQSEAIGT TGNFGVPESS VTELNDEFGP  240
FADKNFNWDA LIEMHGISDQ GADAGSFQVY DVNEELPFPT SIWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-86ERF family protein