PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g223490.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 323aa    MW: 36877.4 Da    PI: 10.327
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g223490.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-086493130
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                      +++WT+eE+  l+ +v ++G g W+tI   
  Pd.00g223490.m01 64 KQKWTAEEEAALKAGVLKHGAGKWRTILTD 93
                      79*************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAAQSERLCY EFAKCLGVRI PQDLPICIAN PFHGFDVNLL RVQNLTGQIS SWKNFGFWLM  60
GAPKQKWTAE EEAALKAGVL KHGAGKWRTI LTDPEFNSIL HLHSNGDLKG KWRNINVTAI  120
WGSRQKAKLA LKRNLPNPKH DNNPLAVSTV IQSHEEIVDA KPLAISGGKL QTTESKQPIA  180
RLDQLILKAI TNLKELGGSD RASIAMYIEK KRVVLFNCNW YDTTQRGRGY KIDRYGITIV  240
NTTRKFHTKD PFVLASQATQ VFYVKEIKNK TWSVVVETKA RNVYEMPNDE GEPYQEEEAQ  300
RIKCWKKKRQ REGQGRKRKG YVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306311KKKRQR
2306317KKKRQREGQGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.11e-51MYB_related family protein