PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g221900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 417aa MW: 45832.4 Da PI: 8.4266 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 87 | 2.2e-27 | 179 | 247 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +akeyhrrhkvCe+hska++v+v g+eqrf lsefDe+krsCrrrLa+hnerrrk+++ Pd.00g221900.m01 179 RCQVEGCHVPLMNAKEYHRRHKVCEMHSKASKVTVLGQEQRF---------LSEFDESKRSCRRRLAGHNERRRKSSH 247 6****************************************9.........9***********************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 417 aa Download sequence |
MEIGGNMNMN MLGHDHNNNS HISSSSRGQN GNNNTYLTNW DIWGGATSTS AAATNNNSFY 60 SPAAVTVAAT AGASSSATCS EASAGGHAFI MGHPLQQQHS SFYGGGARAH YHPDPHLMCL 120 KLGKRHYFED HARAHTHALD DRHVAGLPVG VMSKRGRGGA AAQQLYGSGA TLALKVVPRC 180 QVEGCHVPLM NAKEYHRRHK VCEMHSKASK VTVLGQEQRF LSEFDESKRS CRRRLAGHNE 240 RRRKSSHDSL SRTSSQEKGR FGYLSTPTGR ALSLLSSRNT GFDSWVSPSD LSSRSSAALR 300 ELIAENRAAV LARQLINSSE DRNWDSSSHN HATEDLFCDH GQSWSNSVEP QQHQMFSDRN 360 YQHGWDRFHE GSGAHLTLDL RQAPSPAYGF LPERGKTKAE EDQECDLWNS FHGASVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 3e-26 | SBP family protein |