PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g221900.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 417aa    MW: 45832.4 Da    PI: 8.4266
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g221900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP872.2e-27179247178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +CqvegC++ l +akeyhrrhkvCe+hska++v+v g+eqrf         lsefDe+krsCrrrLa+hnerrrk+++
  Pd.00g221900.m01 179 RCQVEGCHVPLMNAKEYHRRHKVCEMHSKASKVTVLGQEQRF---------LSEFDESKRSCRRRLAGHNERRRKSSH 247
                       6****************************************9.........9***********************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MEIGGNMNMN MLGHDHNNNS HISSSSRGQN GNNNTYLTNW DIWGGATSTS AAATNNNSFY  60
SPAAVTVAAT AGASSSATCS EASAGGHAFI MGHPLQQQHS SFYGGGARAH YHPDPHLMCL  120
KLGKRHYFED HARAHTHALD DRHVAGLPVG VMSKRGRGGA AAQQLYGSGA TLALKVVPRC  180
QVEGCHVPLM NAKEYHRRHK VCEMHSKASK VTVLGQEQRF LSEFDESKRS CRRRLAGHNE  240
RRRKSSHDSL SRTSSQEKGR FGYLSTPTGR ALSLLSSRNT GFDSWVSPSD LSSRSSAALR  300
ELIAENRAAV LARQLINSSE DRNWDSSSHN HATEDLFCDH GQSWSNSVEP QQHQMFSDRN  360
YQHGWDRFHE GSGAHLTLDL RQAPSPAYGF LPERGKTKAE EDQECDLWNS FHGASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.13e-26SBP family protein