PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g220550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 354aa MW: 40500.9 Da PI: 5.4913

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g220550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.3	3.4e-35	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d+e+++++sws+ g+sf+v+d+ ef++++LpkyFkh+nf+SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll Pd.00g220550.m01 18 FLNKTFQVVDDPETNSVVSWSAAGQSFIVWDSYEFSRTLLPKYFKHNNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLL 101 9**************************************************************999.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++ikr+ Pd.00g220550.m01 102 KNIKRRI 108 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MALPKPMEGL HEAGPPPFLN KTFQVVDDPE TNSVVSWSAA GQSFIVWDSY EFSRTLLPKY 60 FKHNNFSSFI RQLNTYGFKK VDPDRWEFAN EGFQGGKKHL LKNIKRRIRY NKQPTVGCVD 120 STKTGLEAEI ESLKKDQDFL KLEIMNLRQQ QKYSQHQLTA IEQRIRSSEC KNQRMLFFLT 180 KTATNSTIVQ QLMQKRVIKR ELDGSDLRKR RRLPSVQVLE SLSDWIDTSL SVDCGSQLEE 240 ELVPMQSVLA EQVAEAKVAK QNEAPLPAPM IDKAVQDFKP HVMAGTGTED MPTAYHGMSE 300 NFLEENVVFD DDEFEVDDSN FYQELEDLIG KPHDWSGYVS HCLREQAGVI GAMP

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MALPKPMEGL HEAGPPPFLN KTFQVVDDPE TNSVVSWSAA GQSFIVWDSY EFSRTLLPKY  60
FKHNNFSSFI RQLNTYGFKK VDPDRWEFAN EGFQGGKKHL LKNIKRRIRY NKQPTVGCVD  120
STKTGLEAEI ESLKKDQDFL KLEIMNLRQQ QKYSQHQLTA IEQRIRSSEC KNQRMLFFLT  180
KTATNSTIVQ QLMQKRVIKR ELDGSDLRKR RRLPSVQVLE SLSDWIDTSL SVDCGSQLEE  240
ELVPMQSVLA EQVAEAKVAK QNEAPLPAPM IDKAVQDFKP HVMAGTGTED MPTAYHGMSE  300
NFLEENVVFD DDEFEVDDSN FYQELEDLIG KPHDWSGYVS HCLREQAGVI GAMP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	107	LKNIKRR
2	207	213	LRKRRRL
3	208	212	RKRRR
4	209	213	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	5e-83	HSF family protein