PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g218150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 241aa MW: 27746.6 Da PI: 4.6456 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.3e-20 | 38 | 92 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le+lFe+++ + +++ +LAk+lgL+ rqV +WFqN+Ra++k Pd.00g218150.m01 38 KNKKRFSDEQIRSLESLFESESRLEPRKKMQLAKELGLQPRQVAIWFQNKRARWK 92 67789*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.5 | 8.9e-39 | 39 | 129 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +k+r+s+eq+++LE+ Fe+e++Lep++K++la+eLglqprqva+WFqn+RAR+k+kqlE+dy+ L+++y++l+++ e+L+ke+++L + + Pd.00g218150.m01 39 NKKRFSDEQIRSLESLFESESRLEPRKKMQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSILRANYNNLASKFEALKKEKQALVIQFQ 129 79************************************************************************************87766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MMLDQIEYSS PTAEDDHEGF SCMSSLEAAG SVKRKSSKNK KRFSDEQIRS LESLFESESR 60 LEPRKKMQLA KELGLQPRQV AIWFQNKRAR WKSKQLERDY SILRANYNNL ASKFEALKKE 120 KQALVIQFQK LNDLMRERPE EERQSCGESD NGDAARSESD QVKLNHLSLE KSEQGGRGVL 180 SDDDSSIKAE YFGLEDEPNL VSLVESADGS LTSTEDWGRL NSEGFFDESI SSDYQWWDFW 240 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 3e-53 | HD-ZIP family protein |