PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g217640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 317aa MW: 36258 Da PI: 6.9041 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.3e-14 | 218 | 269 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+ Pd.00g217640.m01 218 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 269 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MERLQGPIDP CFFGEHLDFQ CLEQGLSTTE SLRFEEEEEA AHLSIPSLED KMPFLQMLQT 60 VNSPPPYFPL KEPSFQALLR LQHLKNPWEL GKAYMPEMET QLQTALEIES CVTHDMVELH 120 SPVKSEAKDL HNHPHSVSAG NLEAVSSECI QDQEQPNSAE INCCRKGNNS SGSPPPTWAQ 180 AQNEPEQTQY PKSPPVTRER RKRKRTRPTK NKEEVESQRM THIAVERNRR RQMNDHLNVL 240 RSLMPTSYIQ RGDQASIVGG AIDFVKELEQ LLQSLEAQKR MRRADQGSNE LGLMRKAPPP 300 PALRMKSQHR TSLRLQT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 200 | 205 | RRKRKR |
2 | 219 | 230 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 2e-44 | bHLH family protein |