PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g217500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 770aa MW: 84309.3 Da PI: 6.1285 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 24 | 68 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ +++da k++G W +I +++g ++t+ q++s+ qk+ Pd.00g217500.m01 24 RERWTEEEHNRFLDALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 770 aa Download sequence |
MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV 120 AEKDGNLLSS TSSSHCKQVV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTMLLEDHC 180 SSVSSANKNS IPTQVALRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK 240 KIVQDNGTSR ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS 300 LGACNQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT TEHESNASRS SVHQSFPAFH 360 PPFTPFHHGQ KDYQSFLHMS STFSSLIVSS LLQNPAAHAA ASFAATFWPY ANAENTEDFP 420 TCPPGGFPSR QMNSPPSMAA IAAATVAAAS AWWASHGLLP LCAPVQTAFS CPPVSMTGVP 480 SMDTGEAPAA NIERGENSLQ IPSLQDQQVD PEHVEAVEAQ HPASKSPSMS SSHSDNGGAE 540 PNTVLKAAAD EKMVASTEEV NNDSNNAKSR KQVDRSSCGS NTPSSSEVET DALEKQEKGK 600 EELKEPDLNH PACDSTYRRS RSIINISDPW KEVSEEGRMA FQALFSREVL PQSFSPPPKD 660 KEHQTTTEEG KQNAEEKDED ASLLDLNKKT WVPFSCHPEV EKNVSPVGDN NAEGLLTIGL 720 SQGKLKARRT GFKPYKRCSV EANENRAANA ISHCEEKGPK RLRLEGEAQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01060.4 | 1e-102 | MYB_related family protein |