PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g216290.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 581aa MW: 67300.3 Da PI: 9.4102

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g216290.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.1	1.5e-23	27	112	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YneY+ ++GFs+r++++++ + g + + +fvCskeg+re+++ +++ r etrtgCka+++ ++e ++w+v++++ +HnH+la Pd.00g216290.m01 27 LYNEYGARIGFSIRRKQKRYD-KYGVVRQLNFVCSKEGFREDSDPC-KEKAIDRLETRTGCKARIRFSLE-GDVWKVSTFNPDHNHKLA 112 7*************99998.7888************9988.89999**************.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MFGNLEESSD ENLYGKIVCN EQEAYDLYNE YGARIGFSIR RKQKRYDKYG VVRQLNFVCS 60 KEGFREDSDP CKEKAIDRLE TRTGCKARIR FSLEGDVWKV STFNPDHNHK LARPDERQFL 120 RSNRKISESH KGVIKTMVSA EFKRLFNKCL EGGETESEFE CTWNEMISKF DLADNTWLKT 180 LYQLREKWCP VFSLDTFTVR IKASQRSESM NNVFHHMCTK TMRLTEFVHH YDKQTNGMRS 240 RELEETFRCN QGLPSRAAKK SGLLLHAASV YTRKFFKLFE TEVIDSLAVR MRQIGSDGTL 300 QTFELNEEGR KRVHVVQFNS LNFNVLCSCK MFESMGLLCR HALRVLNVKE VTEIPSKYIV 360 KRWTKEAKKG WDANEHGESL QVSDKSSVTL HRNRLMRMAY DILSKGVETD NTHRIAMQKL 420 KEMEELIEKY MLKSKSVGTS NEESNGVLND NALVDTNRVG SWYDETPVLD PSCVRPKGIS 480 NARLKPAFEK RKKKTSLSKK IKQPRKGGSS QTSLQAPNYS SMNLPTTNGR FPPSNQDSNF 540 SWSFSQPNVS FTNMLQDQNY LVHLNQDLFS TGFEQHQDPK E

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MFGNLEESSD ENLYGKIVCN EQEAYDLYNE YGARIGFSIR RKQKRYDKYG VVRQLNFVCS  60
KEGFREDSDP CKEKAIDRLE TRTGCKARIR FSLEGDVWKV STFNPDHNHK LARPDERQFL  120
RSNRKISESH KGVIKTMVSA EFKRLFNKCL EGGETESEFE CTWNEMISKF DLADNTWLKT  180
LYQLREKWCP VFSLDTFTVR IKASQRSESM NNVFHHMCTK TMRLTEFVHH YDKQTNGMRS  240
RELEETFRCN QGLPSRAAKK SGLLLHAASV YTRKFFKLFE TEVIDSLAVR MRQIGSDGTL  300
QTFELNEEGR KRVHVVQFNS LNFNVLCSCK MFESMGLLCR HALRVLNVKE VTEIPSKYIV  360
KRWTKEAKKG WDANEHGESL QVSDKSSVTL HRNRLMRMAY DILSKGVETD NTHRIAMQKL  420
KEMEELIEKY MLKSKSVGTS NEESNGVLND NALVDTNRVG SWYDETPVLD PSCVRPKGIS  480
NARLKPAFEK RKKKTSLSKK IKQPRKGGSS QTSLQAPNYS SMNLPTTNGR FPPSNQDSNF  540
SWSFSQPNVS FTNMLQDQNY LVHLNQDLFS TGFEQHQDPK E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-39	FAR1 family protein