PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g211980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 351aa MW: 39150.5 Da PI: 5.6487

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g211980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.9e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G g+W++ ++ g++R++k+c++rw +yl Pd.00g211980.m01 14 KGPWTPEEDQKLVQYIEEHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ +++++ lG++ W++Ia ++ gRt++++k++w+++l Pd.00g211980.m01 67 RGKFTEDEEQTILHLHSILGNK-WSAIATHLD-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRSPCCDES GLKKGPWTPE EDQKLVQYIE EHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TEDEEQTILH LHSILGNKWS AIATHLDGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHQPRT DLFSGLSQLL ALANLQDLMQ QYQPLDIDQH AATLQADQAA QLAKLQYMQH 180 LLQSVAYISS GENYSQNRNT ADTDMEAFNL LNSLVPSIKE NPILNSSQLE NPSSFSPGYG 240 GTSQPLHHQS LLPHDPQVPF SSLPSLNSNH EMGSNYTMVS QEDNPPHDHD DSPWFDNLLS 300 PAPNSIPPTM TGMSISNPGG DVCCSTSSYG GRSSGSSSYW PELFLEDANY A

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRSPCCDES GLKKGPWTPE EDQKLVQYIE EHGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF TEDEEQTILH LHSILGNKWS AIATHLDGRT DNEIKNFWNT HLKKKLIQMG  120
FDPMTHQPRT DLFSGLSQLL ALANLQDLMQ QYQPLDIDQH AATLQADQAA QLAKLQYMQH  180
LLQSVAYISS GENYSQNRNT ADTDMEAFNL LNSLVPSIKE NPILNSSQLE NPSSFSPGYG  240
GTSQPLHHQS LLPHDPQVPF SSLPSLNSNH EMGSNYTMVS QEDNPPHDHD DSPWFDNLLS  300
PAPNSIPPTM TGMSISNPGG DVCCSTSSYG GRSSGSSSYW PELFLEDANY A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-103	MYB family protein