PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g208390.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 424aa    MW: 46181 Da    PI: 5.9019
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g208390.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.52.8e-121231631055
               AP2  10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Pd.00g208390.m02 123 RRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 163
                       479*********......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MLDLNLNVVG SGPNDVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGRE DEEDDVVVTK ELFPVTGALS KWPGQGQSPA SSSLVRKNLM ELGFDHGGSG  120
EVRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINY NLSDYEEDLK  180
QMKNLTKEEF VHILRRQSTG FSRGSSRYRG VTLHKCGRWE ARMGQFLGKK AYDKAAIKCN  240
GREAVTNFEP STYEGEMISE AGNEDGDHNL DLNLGISPPS FGNCQKEVEG HLQFHSGPYD  300
GHNGNRMEHN VNATMSDPPF KGLVMTSQHP PLWNGVYPSY FSNQERATEK RIALGSQGPP  360
NWAWQMHGQV SATPMPLFST AASSGFSFSA TAPSAAVHPL QPSTPTALNL CFTSPATAAA  420
NTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.19e-98AP2 family protein