PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g207640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 769aa MW: 83966.8 Da PI: 5.9867 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 24 | 68 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ +++da k++G W +I +++g ++t+ q++s+ qk+ Pd.00g207640.m01 24 RERWTEEEHNRFLDALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 769 aa Download sequence |
MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV 120 AEKDGKLLSS ASSSHCKQVV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTMLLEDHC 180 SSVSSANKNS IPTQVALRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK 240 KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS 300 LGACNQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT IEHESNASRS SVHQSFPAFH 360 PPFTPFHHGQ KDYQSFLHMS STFSSLIVSS LLQNPAAHAA ASFAATFWPY ANAENAEDSP 420 TCPPGGFPSR QMNSPPSMAA IAAATVAAAS AWWASHGLLP LCAPVQTAFS CPPVSMTGIP 480 SMDTGEAPAA NIERGENSLQ IPSLQDQQVD PEHLEAVEAQ HPASKSPSVS SSHSDNGGAE 540 PNTVLKAASD EKVVASTEEV NDSNNAKTRK QVDRSSCGSN TPSSSEVETD ALEKQENGKE 600 ELKEPDLNHP ASDSTYRRSR SIINISDPWK EVSEEGRMAF QALFSREVLP QSFSPPPKDK 660 EHQTTTEEGK QNAEEKDEDA SLLDLNKKTW VPFSCHPEVE KNVSPVGDDN AEGLLTIGLS 720 QGKLKARRTG FKPYKRCSVE ANENRAANAI SHCEEKGPKR LRLEGEAQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01060.4 | 1e-112 | MYB_related family protein |