PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g207620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 494aa MW: 54962.1 Da PI: 7.7013

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g207620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	9.9e-16	90	134	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+rWT eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Pd.00g207620.m01 90 RDRWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 134 89****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRREDLAIKA RKPYTITKQR DRWTHEEHNK FLEALKLYGR AWQRIEEHIG 120 TKTAVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST 180 CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVFTLL 240 QDGHCSSVSS ANNNSIPSQV ALGNACTLRD ATNESHVTIK LKGNQNLKKI DAKMIVGDNG 300 TSGAPKSGNT NNAFHKELVQ VPSMDTGQAP PAKREKGESS LQIPSLQDQQ LDSRHTEAVE 360 AQHSNIAKAN TDDEEEVAST EEVHDSNHAK SRKQVDRSSY GSNTPSDSED ETAAIEKNEK 420 GKEELKEPNT SHPAAESSQR RSRCVSNMYD SWKEVSEEGR LAFHALFSRD VLPQSFSLTQ 480 DLKIKGHQND GMED

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRREDLAIKA RKPYTITKQR DRWTHEEHNK FLEALKLYGR AWQRIEEHIG  120
TKTAVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST  180
CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVFTLL  240
QDGHCSSVSS ANNNSIPSQV ALGNACTLRD ATNESHVTIK LKGNQNLKKI DAKMIVGDNG  300
TSGAPKSGNT NNAFHKELVQ VPSMDTGQAP PAKREKGESS LQIPSLQDQQ LDSRHTEAVE  360
AQHSNIAKAN TDDEEEVAST EEVHDSNHAK SRKQVDRSSY GSNTPSDSED ETAAIEKNEK  420
GKEELKEPNT SHPAAESSQR RSRCVSNMYD SWKEVSEEGR LAFHALFSRD VLPQSFSLTQ  480
DLKIKGHQND GMED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-47	MYB_related family protein