PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g204150.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 775aa MW: 85616.1 Da PI: 4.7337

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g204150.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.8e-07	632	675	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g204150.m02 632 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 675 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MTCEDTRQQR LARPPPPLSN PSNGDAEQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN 60 APARPGGRFR PKAKPRPSKV AATAATSALP NDRTEKPATL SPIVSDTVPS VKSIDVGDVK 120 VTDHVGSSLA TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG 180 TAAGENADIF SGLECLDGFL GQTTRESAAS KSHVSAESSA FMVCDVAVAQ TFSDCCTTQD 240 PVSCREVSVS NKPEEVQLET KVDGAFSEFE VLDVVSDATI LSGQRVGKFQ PKLKVKKGKE 300 HLHIPPAEVE CMLSQAVLVP SETDMNESSL PAFPPGHVVD HPSPRFGDSS NPHPTSDPLV 360 NTEHIAETIH SDGAIFGDAV HSEDVGGTPG KEGHKSRNRK GSTASNRSQK RKSFAASEEA 420 EGGTSSRKLR KRLPRQEVEE LVHEANEDSF TAEPSSGSNV NEDENNDNEY REHKTSQRKR 480 APRKSKEPES GKEEPVQKRK RAKEAPDKST KDPPKRFSHS TRRTKRHVDK SLLEIPEDEI 540 DHQSLSLKNL IRLAEHRELL AIKEARKMTT PVPDESANND SHKEAYHNEE NEEETFPSEQ 600 DRNSEENQAS YRVNASSFLL NYQSYMDKTP TVRWSKQDTE LFYGAIQQCG SDFTMIQELY 660 FPGRTRHQIK LKFKKEERQN PLRINEAVLS RSTCSTDHSQ FTSYIERLQQ VAQANKEEEA 720 EPTHDTDEGV KKTELEEPEY QEADVAEVQE EAVDAEVDNP LKSDEIDDEE FTWSE

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MTCEDTRQQR LARPPPPLSN PSNGDAEQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN  60
APARPGGRFR PKAKPRPSKV AATAATSALP NDRTEKPATL SPIVSDTVPS VKSIDVGDVK  120
VTDHVGSSLA TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG  180
TAAGENADIF SGLECLDGFL GQTTRESAAS KSHVSAESSA FMVCDVAVAQ TFSDCCTTQD  240
PVSCREVSVS NKPEEVQLET KVDGAFSEFE VLDVVSDATI LSGQRVGKFQ PKLKVKKGKE  300
HLHIPPAEVE CMLSQAVLVP SETDMNESSL PAFPPGHVVD HPSPRFGDSS NPHPTSDPLV  360
NTEHIAETIH SDGAIFGDAV HSEDVGGTPG KEGHKSRNRK GSTASNRSQK RKSFAASEEA  420
EGGTSSRKLR KRLPRQEVEE LVHEANEDSF TAEPSSGSNV NEDENNDNEY REHKTSQRKR  480
APRKSKEPES GKEEPVQKRK RAKEAPDKST KDPPKRFSHS TRRTKRHVDK SLLEIPEDEI  540
DHQSLSLKNL IRLAEHRELL AIKEARKMTT PVPDESANND SHKEAYHNEE NEEETFPSEQ  600
DRNSEENQAS YRVNASSFLL NYQSYMDKTP TVRWSKQDTE LFYGAIQQCG SDFTMIQELY  660
FPGRTRHQIK LKFKKEERQN PLRINEAVLS RSTCSTDHSQ FTSYIERLQQ VAQANKEEEA  720
EPTHDTDEGV KKTELEEPEY QEADVAEVQE EAVDAEVDNP LKSDEIDDEE FTWSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-43	MYB_related family protein