PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g204150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 777aa MW: 85774.2 Da PI: 4.7337

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g204150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.9e-07	634	677	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g204150.m01 634 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 677 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MTCEDTRQQR LARPPPPLSN PSNGDAEQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN 60 APARPGGRFR PKAKPRPSKV AATAATSALP NDRTEKPATL SPIVSDTVPS VKSIDVGDVK 120 VTDHVGSSLA TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG 180 TAAGENADIF SGLECLDGFL GQTTRGTESA ASKSHVSAES SAFMVCDVAV AQTFSDCCTT 240 QDPVSCREVS VSNKPEEVQL ETKVDGAFSE FEVLDVVSDA TILSGQRVGK FQPKLKVKKG 300 KEHLHIPPAE VECMLSQAVL VPSETDMNES SLPAFPPGHV VDHPSPRFGD SSNPHPTSDP 360 LVNTEHIAET IHSDGAIFGD AVHSEDVGGT PGKEGHKSRN RKGSTASNRS QKRKSFAASE 420 EAEGGTSSRK LRKRLPRQEV EELVHEANED SFTAEPSSGS NVNEDENNDN EYREHKTSQR 480 KRAPRKSKEP ESGKEEPVQK RKRAKEAPDK STKDPPKRFS HSTRRTKRHV DKSLLEIPED 540 EIDHQSLSLK NLIRLAEHRE LLAIKEARKM TTPVPDESAN NDSHKEAYHN EENEEETFPS 600 EQDRNSEENQ ASYRVNASSF LLNYQSYMDK TPTVRWSKQD TELFYGAIQQ CGSDFTMIQE 660 LYFPGRTRHQ IKLKFKKEER QNPLRINEAV LSRSTCSTDH SQFTSYIERL QQVAQANKEE 720 EAEPTHDTDE GVKKTELEEP EYQEADVAEV QEEAVDAEVD NPLKSDEIDD EEFTWSE

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MTCEDTRQQR LARPPPPLSN PSNGDAEQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN  60
APARPGGRFR PKAKPRPSKV AATAATSALP NDRTEKPATL SPIVSDTVPS VKSIDVGDVK  120
VTDHVGSSLA TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG  180
TAAGENADIF SGLECLDGFL GQTTRGTESA ASKSHVSAES SAFMVCDVAV AQTFSDCCTT  240
QDPVSCREVS VSNKPEEVQL ETKVDGAFSE FEVLDVVSDA TILSGQRVGK FQPKLKVKKG  300
KEHLHIPPAE VECMLSQAVL VPSETDMNES SLPAFPPGHV VDHPSPRFGD SSNPHPTSDP  360
LVNTEHIAET IHSDGAIFGD AVHSEDVGGT PGKEGHKSRN RKGSTASNRS QKRKSFAASE  420
EAEGGTSSRK LRKRLPRQEV EELVHEANED SFTAEPSSGS NVNEDENNDN EYREHKTSQR  480
KRAPRKSKEP ESGKEEPVQK RKRAKEAPDK STKDPPKRFS HSTRRTKRHV DKSLLEIPED  540
EIDHQSLSLK NLIRLAEHRE LLAIKEARKM TTPVPDESAN NDSHKEAYHN EENEEETFPS  600
EQDRNSEENQ ASYRVNASSF LLNYQSYMDK TPTVRWSKQD TELFYGAIQQ CGSDFTMIQE  660
LYFPGRTRHQ IKLKFKKEER QNPLRINEAV LSRSTCSTDH SQFTSYIERL QQVAQANKEE  720
EAEPTHDTDE GVKKTELEEP EYQEADVAEV QEEAVDAEVD NPLKSDEIDD EEFTWSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-43	MYB_related family protein