PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g199260.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 464aa MW: 51254.2 Da PI: 4.5409

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g199260.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Pd.00g199260.m01 142 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6789****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY 60 VKPSLKRKSD AADYEAESSD RTAAPGYAEA VTSPLQTPVS SKVGKANKTS RLTKCSRSGP 120 QTPASNVGSP SGANLTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNN AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRTGDVDENY PSLQAQVENL SDEERRLDQQ 240 IREMQERLRD LSEDESNKKW LFVTEEDIKG LPCLQNETLI AIKAPHGTTL EVPDPDEAVD 300 YPQRRYRMVL RSTMGPIDVY LVSQFEEKFE EINGVEVPTD IPSSSGVNEN PATTMVTENR 360 GKDVEIQGPD DHRMCADPTA SQDIMSGMMK IVPSDVDSDA DYWLLSDDAD ISITDMWRTE 420 PGVVWNELGA IDEDYPMVNV STPRPQTPPS SSTQVPATAN RTKT

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY  60
VKPSLKRKSD AADYEAESSD RTAAPGYAEA VTSPLQTPVS SKVGKANKTS RLTKCSRSGP  120
QTPASNVGSP SGANLTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNN AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRTGDVDENY PSLQAQVENL SDEERRLDQQ  240
IREMQERLRD LSEDESNKKW LFVTEEDIKG LPCLQNETLI AIKAPHGTTL EVPDPDEAVD  300
YPQRRYRMVL RSTMGPIDVY LVSQFEEKFE EINGVEVPTD IPSSSGVNEN PATTMVTENR  360
GKDVEIQGPD DHRMCADPTA SQDIMSGMMK IVPSDVDSDA DYWLLSDDAD ISITDMWRTE  420
PGVVWNELGA IDEDYPMVNV STPRPQTPPS SSTQVPATAN RTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-154	E2F/DP family protein