PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g199250.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 853aa MW: 101102 Da PI: 8.1557

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g199250.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	51.1	2.2e-16	680	726	23	71
E2F_TDP 23 givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +++++ e+a+ +++k ++RRiYDi+NVLe+++liekk kn+i+wkg Pd.00g199250.m01 680 QNLKILEAAHMW--KKQKVQKRRIYDIINVLEGIGLIEKKLKNRIQWKG 726 555666666655..56677****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MASFKDADPT PGFLTRKDAD VMLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK 60 QKITDPTELA DYRLRKRKEF EDQIRRVKGN VGDWIKYAQW EESHKDFERA RSVWERALEV 120 DHRSPTLWCN YAEAEMKNKF INHARNVWDR AVTLLPRVDK IWYKYIHMEE IIGNVAGARQ 180 IYERWMNWMP DQQGWLSFIK FELRYNEVER ARAIFERFVQ CHPKVGAWIR YAKFEMKNGE 240 VARARNVYER AVEIMGDDEE AEQLFVAFAE FEERCKETDR ARRIYKFALD HTPKERVEDL 300 YKKFVGLEKQ HGNRQGIEDA IVGKRRFQYE DEVRKNPLNY DSWFDYIRLE ESAGNKDRIR 360 EVYERAIANV PHVPEKRYWQ RYIYLWINYA LYEELDAGDM ERARDVYREC LQLIPHKKFS 420 FAKIWLLAAT FEIRQLNLEG ARKILGTAIG KSPKGKIFKK YIEIELNLGN FDRCRKLYGK 480 YLHWSPENCY AWTKYAELEK SLCETERTRA VFELAIAQPA LDIPELLWKA YIDFELSEGE 540 FERTRELYER LLDRTKHLKV WISYAKFEAS AIVEAMCSED QDQDYLREQT KQCVQRVRRI 600 FEKAFNYFRT SAPELKEERC LLLEEMLNVE ASFGDLGDVS LVQSKLPKKL KKRRPILTKD 660 GPAGYEEYID YSFPEEEHTQ NLKILEAAHM WKKQKVQKRR IYDIINVLEG IGLIEKKLKN 720 RIQWKGLDVL RTGDVDGNYP SLQLLFCAEA IKLPREMQER LRDLSEDESN KKWLFVTKKT 780 SRAYLQGSDA DYWLLSDADI SITDMWRTEP GVVWNELGAI DEDYALVNVG TPRPQTPPSS 840 SIQVPATANR TKT

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MASFKDADPT PGFLTRKDAD VMLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK  60
QKITDPTELA DYRLRKRKEF EDQIRRVKGN VGDWIKYAQW EESHKDFERA RSVWERALEV  120
DHRSPTLWCN YAEAEMKNKF INHARNVWDR AVTLLPRVDK IWYKYIHMEE IIGNVAGARQ  180
IYERWMNWMP DQQGWLSFIK FELRYNEVER ARAIFERFVQ CHPKVGAWIR YAKFEMKNGE  240
VARARNVYER AVEIMGDDEE AEQLFVAFAE FEERCKETDR ARRIYKFALD HTPKERVEDL  300
YKKFVGLEKQ HGNRQGIEDA IVGKRRFQYE DEVRKNPLNY DSWFDYIRLE ESAGNKDRIR  360
EVYERAIANV PHVPEKRYWQ RYIYLWINYA LYEELDAGDM ERARDVYREC LQLIPHKKFS  420
FAKIWLLAAT FEIRQLNLEG ARKILGTAIG KSPKGKIFKK YIEIELNLGN FDRCRKLYGK  480
YLHWSPENCY AWTKYAELEK SLCETERTRA VFELAIAQPA LDIPELLWKA YIDFELSEGE  540
FERTRELYER LLDRTKHLKV WISYAKFEAS AIVEAMCSED QDQDYLREQT KQCVQRVRRI  600
FEKAFNYFRT SAPELKEERC LLLEEMLNVE ASFGDLGDVS LVQSKLPKKL KKRRPILTKD  660
GPAGYEEYID YSFPEEEHTQ NLKILEAAHM WKKQKVQKRR IYDIINVLEG IGLIEKKLKN  720
RIQWKGLDVL RTGDVDGNYP SLQLLFCAEA IKLPREMQER LRDLSEDESN KKWLFVTKKT  780
SRAYLQGSDA DYWLLSDADI SITDMWRTEP GVVWNELGAI DEDYALVNVG TPRPQTPPSS  840
SIQVPATANR TKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	2e-22	E2F/DP family protein