PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g192770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 569aa MW: 63774.2 Da PI: 8.3849 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.7 | 1.8e-12 | 377 | 421 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f++L++llP+ +K +Ka++L+ A eY+ sL Pd.00g192770.m01 377 HMISERKRREKLNESFHTLKSLLPPG-----TKKDKASVLTTAREYLTSL 421 8899********************97.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 569 aa Download sequence |
MDTAFQLDEG SRASFLRLIM QSFGCFYICL WSYMPPPSNC LFFLDGVYDE ENQPSSSSGN 60 QARRLFYEYR QSIFNVVENE CVPGFAFRNS LPILELQEID LQRLASSSVQ RQFYQEARIK 120 TAVFMGCKSG EIELGLSNVP QINIKREQMR NWLPEAFSRQ LSPHTAVANR PNNPDQQNPP 180 SSSSSSFRSL STMDSPEYSS ILFNIPTTIT TSHINIPEVF TQPAPNPLQP INIVTSLEPM 240 PPLNIISSSI TSPHQQALQA SSRIRNTQFP NPEIEDAVMT RAILAVLSAS PSSSSSHQPP 300 PQTNVPPSSS TAHFLTPNTS AFKTYNSSPL APRTPKSANV RKQIMLKRSI SFLRSLNLMR 360 LREGIQATRP TSSQLHHMIS ERKRREKLNE SFHTLKSLLP PGTKKDKASV LTTAREYLTS 420 LRAQVAELSK RNQQLEARLP PAAKEAYNEE AAAAAGSSNE RVSVTLTRVV SESTPDQDQQ 480 IFDLQVVLRS VECCTEDMVI RILEFLKRVN NVSLMSMEAN TWMSGSDSNV NRVILRLRVD 540 QGTEWDEAAF QEAVRRVVAD LALNNCRNQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 381 | 386 | ERKRRE |
2 | 382 | 387 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 1e-67 | bHLH family protein |