PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g191500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 261aa MW: 28483 Da PI: 9.7572 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.3 | 3.5e-13 | 51 | 95 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ I+r ++Rt+ q+ s+ qky Pd.00g191500.m01 51 PWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 95 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDCLPTSSAS SSSPSSSRIS VDENSIQDKA SIGYLSDGLI CRAQERKKGV PWTEEEHRTF 60 LIGLEKLGKG DWRGISRNYV TTRTPTQVAS HAQKYFLRQA TLTKKKRRSS LFDMFGRSNN 120 INLSTGHPAN TNTSHYKQPL SDDHQVLPRQ HNNIIHDNSG ATLPLLELGT SVAAQNPNLD 180 NRKPDHCLAN QQLPVWIYGL IDSQMKYSSN IAASKPASSA SVVPDLELKL AAPTSPSLEQ 240 KNKSSPSPAG PLLNLGPISV T |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 108 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 2e-42 | MYB_related family protein |